Overview Annotation GWAS Evidence Associated genes

P42455

Metabolite ID
P42455
Deionized mass
478.2541 Da
Average m/z
479.2613
Average RT
21.3996
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)1.715e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.855e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.508e-16
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.508e-16
Glyma.01G170000 hypothetical protein AT4G36380:ROT3:Cytochrome P450 superfamily protein 1Chr01:50743009–50750309 (+)4.63e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.728e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.728e-12
Glyma.14G198100 hypothetical protein NA 1Chr14:46337677–46340654 (+)4.722e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.855e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)8.638e-14