Overview Annotation GWAS Evidence Associated genes

P42402

Metabolite ID
P42402
Deionized mass
248.1772 Da
Average m/z
249.1849
Average RT
21.3722
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
2
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

2 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.284e-12
Glyma.16G058800 hypothetical protein AT5G57890:AT5G57890:Glutamine amidotransferase type 1 family protein__AT1G25155:AT1G24909:Glutamine amidotransferase ty… 1Chr16:5763908–5768668 (+)6.113e-11