Overview Annotation GWAS Evidence Associated genes

P42329

Metabolite ID
P42329
Deionized mass
553.2508 Da
Average m/z
554.2540
Average RT
21.3306
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 4Chr03:2423540–2428634 (-)3.444e-14
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)4.169e-12
Glyma.03G022400 hypothetical protein NA 1Chr03:2334661–2335316 (+)1.597e-12
Glyma.07G070000 hypothetical protein AT5G24020:MIND:septum site-determining protein (MIND) 1Chr07:6348862–6349428 (-)3.454e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)8.686e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.063e-11