Overview Annotation GWAS Evidence Associated genes

P42204

Metabolite ID
P42204
Deionized mass
188.1102 Da
Average m/z
189.1170
Average RT
21.2020
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G010600 hypothetical protein NA 1Chr07:811039–816200 (+)4.19e-11
Glyma.07G010700 hypothetical protein AT3G13730:CYP90D1:cytochrome P450, family 90, subfamily D, polypeptide 1 1Chr07:817488–822276 (+)4.19e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)1.625e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)1.625e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)7.665e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.977e-11
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)8.459e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.373e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.293e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.373e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.373e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.125e-11
Glyma.20G217500 hypothetical protein AT5G41950:AT5G41950:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:45312584–45322950 (-)2.878e-12