Overview Annotation GWAS Evidence Associated genes

P42200

Metabolite ID
P42200
Deionized mass
308.1969 Da
Average m/z
617.4015
Average RT
21.2006
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G173500 hypothetical protein AT2G36850:GSL8:glucan synthase-like 8 3Chr06:14595971–14646811 (+)3.503e-12
Glyma.06G173400 hypothetical protein NA 1Chr06:14583960–14595832 (+)3.503e-12
Glyma.06G173800 hypothetical protein AT3G48430:REF6:relative of early flowering 6 1Chr06:14676662–14687185 (+)3.683e-11
Glyma.06G174000 hypothetical protein AT3G48430:REF6:relative of early flowering 6 1Chr06:14684775–14701032 (-)3.503e-12
Glyma.09G097100 hypothetical protein AT4G02050:STP7:sugar transporter protein 7 1Chr09:15237041–15241998 (+)2.063e-11
Glyma.09G098400 hypothetical protein NA 1Chr09:17245246–17265546 (+)2.063e-11
Glyma.09G098600 hypothetical protein NA 1Chr09:17304125–17309053 (+)2.063e-11
Glyma.09G099900 hypothetical protein AT1G56120:AT1G56120:Leucine-rich repeat transmembrane protein kinase 1Chr09:18139744–18160093 (+)2.063e-11
Glyma.09G102000 hypothetical protein AT1G50900:GDC1:Ankyrin repeat family protein 1Chr09:18505907–18507835 (+)2.063e-11
Glyma.15G137200 hypothetical protein AT3G06260:GATL4:galacturonosyltransferase-like 4 1Chr15:11141246–11143288 (-)4.373e-11
Glyma.19G248100 hypothetical protein NA 1Chr19:49418160–49419462 (+)5.224e-11
Glyma.19G248200 hypothetical protein AT1G08640:CJD1:Chloroplast J-like domain 1 1Chr19:49422698–49427819 (+)5.224e-11