Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P42126

Metabolite ID
P42126
Deionized mass
258.0891 Da
Average m/z
259.0949
Average RT
21.1401
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
50
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

50 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G147300 hypothetical protein NA 4Chr08:11238871–11242682 (+)3.059e-16
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 4Chr08:11253074–11256505 (+)8.213e-15
Glyma.13G224800 hypothetical protein NA 3Chr13:33748627–33756494 (-)2.499e-11
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)2.901e-13
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)1.045e-11
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 2Chr15:48661607–48665946 (-)4.705e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)1.923e-13
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)1.947e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)8.953e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)8.817e-13
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.26e-14
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.972e-14
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.024e-14
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.024e-14
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.024e-14
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.024e-14
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.024e-14
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.024e-14
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.024e-14
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)2.901e-13
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)1.7e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)9.663e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.731e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.27e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)3.358e-11
Glyma.08G104600 hypothetical protein AT1G27930:AT1G27930:glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 1Chr08:8045602–8047222 (-)2.09e-11
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)3.006e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)5.143e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)5.143e-11
Glyma.08G143400 hypothetical protein NA 1Chr08:10941737–10944154 (+)7.92e-11
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)1.105e-18
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)1.741e-15
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.819e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.884e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.068e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)5.047e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.987e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)4.987e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)4.987e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.756e-12
Glyma.13G224300 hypothetical protein NA 1Chr13:33703380–33715996 (-)2.499e-11
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)3.787e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.108e-12
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)3.974e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)3.974e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)4.205e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)5.608e-12
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)9.873e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)2.627e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)5.47e-11