Overview Annotation GWAS Evidence Associated genes

P42000

Metabolite ID
P42000
Deionized mass
1652.9125 Da
Average m/z
827.4633
Average RT
21.0787
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G216700 hypothetical protein NA 3Chr15:35649229–35652466 (-)1.759e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.978e-11
Glyma.15G216900 hypothetical protein NA 2Chr15:35680524–35686654 (-)4.928e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)1.512e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)9.177e-11
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)8.052e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)5.063e-12
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 1Chr15:33408140–33467420 (+)3.195e-11
Glyma.15G216800 hypothetical protein NA 1Chr15:35673556–35678305 (-)4.089e-11
Glyma.15G217100 hypothetical protein NA 1Chr15:35830853–35832075 (-)4.928e-12
Glyma.15G219200 hypothetical protein NA 1Chr15:37859579–37901021 (-)1.073e-12
Glyma.15G219600 hypothetical protein NA 1Chr15:38433708–38438520 (-)2.824e-12
Glyma.15G220600 hypothetical protein NA 1Chr15:39762186–39771163 (-)2.824e-12
Glyma.15G220800 hypothetical protein NA 1Chr15:39878275–39882927 (+)2.824e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)1.512e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.978e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.978e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.978e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.978e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)7.535e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.7e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.444e-11