Overview Annotation GWAS Evidence Associated genes

P41960

Metabolite ID
P41960
Deionized mass
2130.9898 Da
Average m/z
1066.5067
Average RT
21.0690
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G059200 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 4Chr07:5284646–5293001 (-)4.798e-13
Glyma.07G059300 hypothetical protein AT2G39780:RNS2:ribonuclease 2 3Chr07:5293201–5300088 (-)2.844e-12
Glyma.07G058900 hypothetical protein NA 2Chr07:5268461–5272348 (+)9.412e-14
Glyma.07G058600 hypothetical protein AT5G12230:MED19A:mediator of RNA polymerase II transcription subunit 19a-like protein 1Chr07:5240996–5247125 (-)2.379e-14
Glyma.07G058700 hypothetical protein AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein 1Chr07:5251199–5260710 (+)2.379e-14
Glyma.07G059100 hypothetical protein NA 1Chr07:5282519–5283075 (-)4.798e-13
Glyma.07G059600 hypothetical protein AT2G04039:AT2G04039:DUF2996 family protein 1Chr07:5317552–5319355 (-)1.424e-11
Glyma.15G233600 hypothetical protein NA 1Chr15:43971478–43972713 (+)6.344e-11