Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P41942

Metabolite ID
P41942
Deionized mass
766.4422 Da
Average m/z
767.4528
Average RT
21.0595
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 6Chr16:36856833–36863994 (-)3.028e-14
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)7.863e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.669e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.669e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)9.727e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.59e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)2.091e-14
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)7.636e-14
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.751e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.751e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.751e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)5.928e-12
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)8.404e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.286e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.286e-12
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)1.27e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)6.644e-13
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)1.107e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)3.132e-11
Glyma.11G119600 hypothetical protein AT2G16130:PMT2:polyol/monosaccharide transporter 2 1Chr11:9127497–9129972 (-)3.638e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.726e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.726e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.368e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.368e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)4.16e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)6.105e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.039e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.641e-12
Glyma.15G152000 hypothetical protein NA 1Chr15:12592655–12594969 (+)4.573e-11
Glyma.15G152400 hypothetical protein NA 1Chr15:12641790–12646649 (+)8.343e-12
Glyma.15G154600 hypothetical protein AT2G34900:IMB1:Transcription factor GTE6 1Chr15:12869005–12877308 (-)2.822e-14
Glyma.15G154800 hypothetical protein AT1G30840:PUP4:purine permease 4 1Chr15:12885652–12899379 (+)2.822e-14
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.639e-15
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)6.099e-19
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)4.708e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)5.698e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)7.91e-13
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)7.863e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.056e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.056e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.705e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.771e-14
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.367e-11