Overview Annotation GWAS Evidence Associated genes

P41916

Metabolite ID
P41916
Deionized mass
1094.4826 Da
Average m/z
548.2500
Average RT
21.0158
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G216700 hypothetical protein NA 2Chr15:35649229–35652466 (-)3.612e-11
Glyma.15G223600 hypothetical protein NA 2Chr15:40694344–40709542 (+)3.019e-11
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)9.119e-11
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 1Chr15:33408140–33467420 (+)1.182e-11
Glyma.15G216900 hypothetical protein NA 1Chr15:35680524–35686654 (-)6.701e-11
Glyma.15G217100 hypothetical protein NA 1Chr15:35830853–35832075 (-)6.701e-11
Glyma.15G219200 hypothetical protein NA 1Chr15:37859579–37901021 (-)9.995e-13
Glyma.15G224500 hypothetical protein NA 1Chr15:40874637–40886928 (-)4.564e-12
Glyma.15G233600 hypothetical protein NA 1Chr15:43971478–43972713 (+)3.425e-16