Overview Annotation GWAS Evidence Associated genes

P41855

Metabolite ID
P41855
Deionized mass
522.1143 Da
Average m/z
523.1200
Average RT
20.9772
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G104400 hypothetical protein AT2G42790:CSY3:citrate synthase 3 2Chr18:11482927–11506669 (-)7.366e-18
Glyma.01G037200 hypothetical protein NA 1Chr01:3946315–3948100 (-)6.164e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)3.619e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.149e-11
Glyma.08G136700 hypothetical protein NA 1Chr08:10457207–10460163 (-)5.71e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)1.944e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)9.825e-11
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)1.265e-11
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)1.265e-11
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)1.265e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.677e-14
Glyma.15G150300 hypothetical protein AT5G49130:AT5G49130:MATE efflux family protein 1Chr15:12416065–12418420 (-)6.129e-11
Glyma.15G150400 hypothetical protein AT3G06840:AT3G06840:uncharacterized protein 1Chr15:12436393–12437800 (-)7.506e-11
Glyma.18G102100 hypothetical protein AT1G50900:GDC1:Ankyrin repeat family protein 1Chr18:10822751–10828225 (+)7.366e-18
Glyma.18G104600 hypothetical protein AT2G42810:PP5.2:protein phosphatase 5.2 1Chr18:11541115–11551882 (-)7.366e-18
Glyma.18G104700 hypothetical protein NA 1Chr18:11598036–11603174 (+)7.366e-18
Glyma.20G217100 hypothetical protein AT1G64640:ENODL8:early nodulin-like protein 8 1Chr20:45278452–45280126 (-)6.11e-11