Overview Annotation GWAS Evidence Associated genes

P41745

Metabolite ID
P41745
Deionized mass
116.0622 Da
Average m/z
117.0691
Average RT
20.9220
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
55
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

55 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)1.702e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 2Chr06:48170133–48173010 (-)2.704e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.315e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.298e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)5.384e-13
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 2Chr14:46291986–46298337 (+)5.892e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)5.966e-12
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)4.04e-11
Glyma.01G021700 hypothetical protein NA 1Chr01:2197811–2200232 (+)5.596e-12
Glyma.01G022000 hypothetical protein NA 1Chr01:2209688–2210849 (-)5.596e-12
Glyma.01G022200 hypothetical protein NA 1Chr01:2212834–2213622 (+)5.596e-12
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)3.435e-11
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 1Chr03:1780719–1783735 (+)8.85e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)2.146e-12
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)2.428e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)1.185e-15
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)2.105e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.744e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.686e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.05e-11
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)4.58e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)2.695e-13
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)2.695e-13
Glyma.07G014300 hypothetical protein NA 1Chr07:1115661–1120213 (-)2.691e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.292e-12
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)5.056e-13
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)5.056e-13
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.989e-11
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)1.208e-12
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)1.864e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.57e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.57e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.525e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.622e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.384e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.402e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.833e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.833e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.833e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)2.808e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)7.819e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.049e-12
Glyma.14G197600 hypothetical protein AT5G58490:AT5G58490:NAD(P)-binding Rossmann-fold superfamily protein 1Chr14:46288254–46290941 (+)5.892e-12
Glyma.14G197900 hypothetical protein AT1G07050:AT1G07050:CCT motif family protein 1Chr14:46327072–46328700 (+)5.892e-12
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)4.922e-11
Glyma.14G198500 hypothetical protein NA 1Chr14:46352163–46354775 (-)5.892e-12
Glyma.14G198600 hypothetical protein NA 1Chr14:46360801–46362778 (+)5.892e-12
Glyma.14G198700 hypothetical protein AT1G07010:SLP1:Calcineurin-like metallo-phosphoesterase superfamily protein 1Chr14:46367820–46374604 (+)5.892e-12
Glyma.14G198800 hypothetical protein AT1G07030:AT1G07030:Mitochondrial substrate carrier family protein 1Chr14:46375963–46379746 (-)1.696e-12
Glyma.14G199000 hypothetical protein AT5G07120:SNX2b:sorting nexin 2B__AT5G58440:SNX2a:sorting nexin 2A 1Chr14:46413031–46419952 (+)7.975e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.966e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.284e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.366e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)3.608e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)9.285e-11