Overview Annotation GWAS Evidence Associated genes

P41666

Metabolite ID
P41666
Deionized mass
962.5366 Da
Average m/z
963.5463
Average RT
20.9026
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G050000 hypothetical protein NA 2Chr09:4357237–4360131 (+)4.161e-13
Glyma.16G146500 hypothetical protein AT5G23670:LCB2:long chain base2 2Chr16:30737459–30743042 (+)6.178e-11
Glyma.20G220200 hypothetical protein AT5G24560:PP2-B12:phloem protein 2-B12 2Chr20:45549852–45551588 (-)2.611e-12
Glyma.08G094400 hypothetical protein AT1G18390:AT1G18390:Serine/Threonine kinase family catalytic domain protein 1Chr08:7174551–7178950 (-)6.407e-11
Glyma.09G050100 hypothetical protein AT1G30910:AT1G30910:Molybdenum cofactor sulfurase family protein__AT5G44720:AT5G44720:Molybdenum cofactor sulfurase fam… 1Chr09:4363430–4366853 (+)4.161e-13
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)1.13e-11
Glyma.16G146600 hypothetical protein AT1G12840:DET3:vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) 1Chr16:30744340–30749727 (+)6.178e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)6.178e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.178e-11
Glyma.20G220600 hypothetical protein NA 1Chr20:45573658–45575686 (-)2.899e-11
Glyma.20G221000 hypothetical protein AT3G04240:SEC:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:45589735–45599067 (-)7.429e-11