Overview Annotation GWAS Evidence Associated genes

P41446

Metabolite ID
P41446
Deionized mass
379.3063 Da
Average m/z
380.3129
Average RT
20.7722
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
3
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

3 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G019200 hypothetical protein AT4G02460:PMS1:DNA mismatch repair protein 2Chr10:1656738–1663920 (-)2.804e-14
Glyma.10G019300 hypothetical protein AT4G02480:AT4G02480:AAA-type ATPase family protein 2Chr10:1665415–1677518 (-)2.804e-14
Glyma.10G019100 LSM4 AT5G27720:emb1644:Small nuclear ribonucleoprotein family protein 1Chr10:1652905–1655407 (-)2.804e-14