Overview Annotation GWAS Evidence Associated genes

P41439

Metabolite ID
P41439
Deionized mass
162.1032 Da
Average m/z
163.1103
Average RT
20.7684
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G168900 hypothetical protein AT3G11964:AT3G11964:RIBOSOMAL RNA PROCESSING 5 2Chr02:26029033–26069434 (-)2.011e-11
Glyma.02G176100 hypothetical protein NA 2Chr02:28720956–28726702 (-)3.983e-12
Glyma.02G182600 hypothetical protein AT3G57540:AT3G57540:Remorin family protein 2Chr02:31342036–31344739 (+)3.983e-12
Glyma.02G194200 hypothetical protein NA 2Chr02:36747224–36756569 (+)2.011e-11
Glyma.08G023600 hypothetical protein NA 2Chr08:1877250–1880580 (-)2.654e-14
Glyma.08G024200 hypothetical protein AT4G10920:KELP:transcriptional coactivator p15 (PC4) family protein (KELP) 2Chr08:1930916–1935158 (+)2.654e-14
Glyma.11G119800 hypothetical protein NA 2Chr11:9138785–9142228 (+)8.731e-11
Glyma.11G119900 hypothetical protein NA 2Chr11:9149205–9152820 (-)8.731e-11
Glyma.11G121000 hypothetical protein NA 2Chr11:9238748–9241027 (+)8.731e-11
Glyma.02G075300 hypothetical protein AT1G71870:AT1G71870:MATE efflux family protein 1Chr02:6597633–6602675 (-)9.322e-21
Glyma.02G093800 hypothetical protein NA 1Chr02:8383112–8391839 (+)2.654e-14
Glyma.02G119900 hypothetical protein NA 1Chr02:11814533–11815915 (+)4.133e-11
Glyma.02G134000 hypothetical protein AT1G49640:AT1G49640:alpha/beta-Hydrolases superfamily protein__AT1G19190:AT1G19190:alpha/beta-Hydrolases superfamily pr… 1Chr02:13858143–13860616 (-)2.654e-14
Glyma.02G134100 hypothetical protein NA 1Chr02:13865354–13866667 (-)2.654e-14
Glyma.02G134300 hypothetical protein AT2G15730:AT2G15730:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr02:13882473–13887471 (+)2.654e-14
Glyma.02G135400 hypothetical protein NA 1Chr02:14005232–14008459 (-)2.654e-14
Glyma.02G135900 hypothetical protein NA 1Chr02:14086858–14097578 (-)2.654e-14
Glyma.02G136600 hypothetical protein NA 1Chr02:14129031–14133215 (-)2.654e-14
Glyma.02G137000 hypothetical protein AT3G52050:AT3G52050:5'-3' exonuclease family protein 1Chr02:14164694–14180125 (-)2.654e-14
Glyma.02G137100 hypothetical protein AT2G43650:EMB2777:Sas10/U3 ribonucleoprotein (Utp) family protein 1Chr02:14181768–14187505 (+)2.654e-14
Glyma.02G168700 hypothetical protein NA 1Chr02:26007961–26014355 (+)2.011e-11
Glyma.02G168800 hypothetical protein NA 1Chr02:26017564–26023046 (+)2.011e-11
Glyma.02G169600 hypothetical protein AT2G42520:AT2G42520:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr02:26174033–26188929 (+)2.011e-11
Glyma.02G171700 hypothetical protein NA 1Chr02:27040250–27043508 (-)2.011e-11
Glyma.02G175200 hypothetical protein NA 1Chr02:28117171–28121087 (+)3.983e-12
Glyma.02G175300 hypothetical protein NA 1Chr02:28133813–28138722 (-)3.983e-12
Glyma.02G176000 hypothetical protein AT3G12160:RABA4D:RAB GTPase homolog A4D 1Chr02:28704515–28707168 (+)3.983e-12
Glyma.02G176200 hypothetical protein NA 1Chr02:28900535–28904420 (+)3.983e-12
Glyma.02G180400 hypothetical protein NA 1Chr02:30688692–30690375 (-)3.983e-12
Glyma.02G182300 hypothetical protein NA 1Chr02:31215772–31216618 (+)3.983e-12
Glyma.02G182400 hypothetical protein AT3G57550:AGK2:guanylate kinase 1Chr02:31236115–31240230 (-)3.983e-12
Glyma.02G182500 hypothetical protein AT1G59950:AT1G59950:NAD(P)-linked oxidoreductase superfamily protein 1Chr02:31249609–31253723 (+)3.983e-12
Glyma.02G182800 hypothetical protein AT5G13650:SVR3:elongation factor family protein 1Chr02:31359425–31367667 (+)3.983e-12
Glyma.02G185000 hypothetical protein AT4G23540:AT4G23540:ARM repeat superfamily protein 1Chr02:32574799–32582711 (+)3.983e-12
Glyma.02G188800 hypothetical protein NA 1Chr02:35266321–35270969 (+)3.983e-12
Glyma.02G192700 hypothetical protein NA 1Chr02:36448860–36454305 (-)2.011e-11
Glyma.02G193100 hypothetical protein NA 1Chr02:36482116–36488821 (-)2.011e-11
Glyma.02G193400 hypothetical protein NA 1Chr02:36571666–36579154 (+)2.011e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)2.011e-11
Glyma.02G193900 hypothetical protein AT5G06480:AT5G06480:Immunoglobulin E-set superfamily protein 1Chr02:36713791–36716012 (-)2.011e-11
Glyma.07G059200 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr07:5284646–5293001 (-)1.223e-11
Glyma.08G023800 hypothetical protein AT4G10930:AT4G10930:RING/U-box protein 1Chr08:1891782–1904491 (+)2.654e-14
Glyma.08G023900 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic AT4G23940:FtsHi1:FtsH extracellular protease family 1Chr08:1910908–1919382 (+)2.654e-14
Glyma.11G096200 hypothetical protein AT3G22200:POP2:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 1Chr11:7315127–7325455 (+)9.322e-21
Glyma.11G115200 hypothetical protein AT2G21550:AT2G21550:Bifunctional dihydrofolate reductase/thymidylate synthase 1Chr11:8810773–8815870 (+)9.322e-21
Glyma.11G116200 hypothetical protein AT4G35200:AT4G35200: 1Chr11:8849839–8850693 (+)3.553e-16
Glyma.11G120600 hypothetical protein AT3G18850:LPAT5:lysophosphatidyl acyltransferase 5 1Chr11:9200478–9204544 (-)3.553e-16
Glyma.11G120800 hypothetical protein AT1G49380:AT1G49380:cytochrome c biosis protein family 1Chr11:9222934–9228246 (+)8.731e-11
Glyma.11G121200 hypothetical protein AT4G34360:AT4G34360:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:9252726–9255419 (+)8.731e-11
Glyma.20G096200 hypothetical protein NA 1Chr20:33923470–33925550 (-)2.654e-14
Glyma.20G096800 hypothetical protein NA 1Chr20:33996507–33997670 (-)2.654e-14