Overview Annotation GWAS Evidence Associated genes

P41174

Metabolite ID
P41174
Deionized mass
502.1510 Da
Average m/z
503.1571
Average RT
20.5916
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G287600 hypothetical protein NA 1Chr18:56754676–56759595 (-)2.173e-12
Glyma.18G287900 hypothetical protein NA 1Chr18:56777135–56784200 (+)2.173e-12
Glyma.18G288200 DNA repair protein XRCC3 homolog AT5G57450:XRCC3:homolog of X-ray repair cross complementing 3 (XRCC3) 1Chr18:56795210–56796076 (-)2.173e-12
Glyma.18G288600 hypothetical protein AT2G42010:PLDBETA1:phospholipase D beta 1 1Chr18:56840393–56849007 (-)2.173e-12
Glyma.18G290200 hypothetical protein AT1G04950:TAFII59:TATA BOX ASSOCIATED FACTOR II 59 1Chr18:56937764–56943242 (+)2.173e-12
Glyma.18G290600 hypothetical protein NA 1Chr18:56964092–56966315 (-)2.173e-12
Glyma.18G290700 hypothetical protein AT5G57080:AT5G57080:uncharacterized protein__AT4G26055:AT4G26055:uncharacterized protein 1Chr18:56967231–56971413 (+)2.173e-12
Glyma.18G291100 hypothetical protein AT2G39630:AT2G39630:Nucleotide-diphospho-sugar transferases superfamily protein 1Chr18:56987115–56991563 (-)2.173e-12
Glyma.18G291500 hypothetical protein AT2G39640:AT2G39640:glycosyl hydrolase family 17 protein__AT3G55430:AT3G55430:O-Glycosyl hydrolases family 17 protein 1Chr18:57008006–57011737 (-)2.173e-12