Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P41144

Metabolite ID
P41144
Deionized mass
192.1506 Da
Average m/z
193.1571
Average RT
20.5737
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
74
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

74 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)2.95e-13
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)4.602e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)6.382e-14
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 3Chr16:36943073–36948828 (+)3.856e-13
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.421e-14
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 2Chr08:11253074–11256505 (+)8.504e-11
Glyma.08G149500 hypothetical protein NA 2Chr08:11460264–11465243 (-)1.387e-14
Glyma.16G055700 hypothetical protein AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily 2Chr16:5450641–5458545 (-)1.861e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)5.376e-12
Glyma.17G208400 hypothetical protein NA 2Chr17:34184145–34222159 (-)6.492e-13
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)5.72e-13
Glyma.01G047100 hypothetical protein AT1G14250:AT1G14250:GDA1/CD39 nucleoside phosphatase family protein__AT1G14230:AT1G14230:GDA1/CD39 nucleoside phosphata… 1Chr01:5503526–5511806 (+)8.963e-12
Glyma.01G047300 hypothetical protein AT1G27090:AT1G27090:glycine-rich protein 1Chr01:5514127–5517339 (+)6.943e-11
Glyma.01G047500 hypothetical protein NA 1Chr01:5528742–5532260 (-)6.943e-11
Glyma.01G047600 hypothetical protein NA 1Chr01:5545562–5545978 (+)5.385e-11
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)4.259e-15
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)4.259e-15
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)4.695e-16
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.952e-20
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)4.902e-17
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.681e-20
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)6.875e-19
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)4.291e-17
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)4.291e-17
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)4.291e-17
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)4.291e-17
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)4.291e-17
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)4.291e-17
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)4.291e-17
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.421e-14
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)2.772e-13
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)2.071e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.14e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)6.277e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.41e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.41e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.627e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.195e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.195e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.195e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.61e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.552e-24
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.114e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.195e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.195e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)2.974e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)2.974e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.211e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)1.385e-11
Glyma.08G148700 hypothetical protein NA 1Chr08:11384601–11387727 (-)3.365e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)4.702e-12
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)1.012e-11
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)6.554e-15
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.312e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.211e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.312e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.312e-13
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.332e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.402e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)7.337e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)6.382e-14
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.856e-13
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)5.415e-12
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)5.415e-12
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)5.415e-12
Glyma.17G207000 hypothetical protein NA 1Chr17:33925621–33935113 (+)6.492e-13
Glyma.17G208500 hypothetical protein NA 1Chr17:34224093–34230310 (-)6.492e-13
Glyma.17G209600 hypothetical protein AT2G25530:AT2G25530:AFG1-like ATPase family protein 1Chr17:34571688–34581787 (-)6.492e-13
Glyma.17G209700 hypothetical protein NA 1Chr17:34586468–34590309 (+)6.492e-13
Glyma.19G125300 hypothetical protein AT3G56880:AT3G56880:VQ motif-containing protein__AT2G41010:CAMBP25:calmodulin (CAM)-binding protein of 25 kDa 1Chr19:38346007–38347425 (-)1.974e-11
Glyma.19G125400 hypothetical protein AT3G12390:AT3G12390:Nascent polypeptide-associated complex (NAC), alpha subunit family protein 1Chr19:38371477–38374357 (-)1.974e-11
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 1Chr19:38410642–38423531 (+)4.699e-11
Glyma.19G245800 hypothetical protein AT3G04690:ANX1:Malectin/receptor-like protein kinase family protein 1Chr19:49263978–49267290 (+)1.559e-13
Glyma.19G246000 hypothetical protein AT3G04630:WDL1:WVD2-like 1 1Chr19:49272477–49277569 (-)8.159e-13