Overview Annotation GWAS Evidence Associated genes

P41120

Metabolite ID
P41120
Deionized mass
422.2617 Da
Average m/z
423.2695
Average RT
20.5659
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)2.296e-11
Glyma.03G016900 hypothetical protein NA 1Chr03:1702419–1707451 (+)5.95e-12
Glyma.03G017000 hypothetical protein AT3G61060:PP2-A13:phloem protein 2-A13 1Chr03:1716204–1719596 (+)1.732e-11
Glyma.03G017500 hypothetical protein NA 1Chr03:1761083–1762800 (+)4.045e-11
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)5.098e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)5.098e-11
Glyma.08G110200 hypothetical protein NA 1Chr08:8471393–8473156 (+)8.39e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)5.582e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)6.212e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.306e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)2.898e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)2.671e-11