Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P41081

Metabolite ID
P41081
Deionized mass
260.2117 Da
Average m/z
261.2185
Average RT
20.5469
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
75
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

75 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)9.614e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)8.186e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)4.55e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)1.125e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 2Chr02:39040135–39043181 (-)4.705e-14
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)2.809e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.623e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.288e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.288e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.051e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)9.05e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.9e-11
Glyma.02G205500 hypothetical protein AT5G57870:eIFiso4G1:MIF4G domain-containing protein / MA3 domain-containing protein 1Chr02:39045905–39052694 (-)7.963e-11
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)2.623e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.949e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)9.504e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)9.504e-11
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)8.333e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.334e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.9e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.388e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.165e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.487e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.837e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.837e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.308e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)9.617e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)9.617e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.313e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.316e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.623e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.623e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.623e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.623e-14
Glyma.08G124200 hypothetical protein AT1G30500:NF-YA7:nuclear factor Y, subunit A7 1Chr08:9531363–9535558 (+)2.289e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.595e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)6.775e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)9.034e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)2.385e-11
Glyma.12G018000 hypothetical protein NA 1Chr12:1252709–1256330 (-)3.023e-11
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)2.848e-13
Glyma.12G035600 hypothetical protein AT5G45600:GAS41:YEATS family protein 1Chr12:2597690–2600977 (+)4.47e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.109e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)5.109e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.59e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.59e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.288e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)9.887e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.631e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.398e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.058e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.402e-11
Glyma.15G233600 hypothetical protein NA 1Chr15:43971478–43972713 (+)6.671e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)7.483e-13
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.21e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)8.186e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)8.186e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)8.186e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)8.186e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.322e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.333e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.222e-12
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)2.285e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)4.949e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)4.972e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.404e-12
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)1.125e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.925e-11
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)4.429e-11
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)4.429e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)1.36e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.344e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.344e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)7.018e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)3.184e-12