Overview Annotation GWAS Evidence Associated genes

P41009

Metabolite ID
P41009
Deionized mass
894.4925 Da
Average m/z
895.5023
Average RT
20.5077
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
35
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

35 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.056e-12
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 2Chr06:14104416–14111842 (+)1.88e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 2Chr16:36943073–36948828 (+)9.795e-13
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)8.751e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.048e-11
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)8.831e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.402e-12
Glyma.09G011700 hypothetical protein NA 1Chr09:894858–897607 (-)4.921e-11
Glyma.09G012200 hypothetical protein AT2G35760:AT2G35760:Uncharacterized protein family (UPF0497) 1Chr09:937048–940244 (+)1.372e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)7.87e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.168e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)2.515e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)9.367e-13
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)2.918e-12
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)1.557e-13
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)2.099e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)2.019e-15
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)3.669e-12
Glyma.09G270000 hypothetical protein AT3G54220:SCR:GRAS family transcription factor 1Chr09:48704737–48708820 (-)3.729e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)2.18e-13
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)2.259e-16
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)1.995e-13
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)1.995e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.994e-11
Glyma.11G110100 hypothetical protein AT2G16510:AT2G16510:ATPase, F0/V0 complex, subunit C protein 1Chr11:8397135–8398949 (-)9.687e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)3.991e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)6.85e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.056e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)1.622e-11
Glyma.16G208100 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 1Chr16:36776806–36778169 (+)1.19e-11
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)1.176e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.146e-14
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.206e-15
Glyma.17G219500 hypothetical protein NA 1Chr17:37109440–37111216 (-)6.771e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)2.212e-12