P40970
Metabolite ID
P40970
Deionized mass
338.2072 Da
Average m/z
339.2142
Average RT
20.4727
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
108
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
Loading GWAS records…
Loading Manhattan plot…
This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
Loading Q–Q plot…
Loading GWAS summary…
Associated genes
108 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.13G224800 | hypothetical protein | NA | 3 | Chr13:33748627–33756494 (-) | 4.672e-12 | |
| Glyma.16G209300 | hypothetical protein | NA | 3 | Chr16:36856833–36863994 (-) | 4.658e-12 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 2 | Chr05:32021521–32025767 (-) | 7.309e-15 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 2 | Chr16:36806718–36809299 (+) | 2.105e-11 | |
| Glyma.01G034700 | hypothetical protein | NA | 1 | Chr01:3599923–3602578 (-) | 2.401e-11 | |
| Glyma.01G120000 | hypothetical protein | NA | 1 | Chr01:41270985–41274854 (+) | 5.284e-12 | |
| Glyma.01G121400 | hypothetical protein | AT5G01400:ESP4:HEAT repeat-containing protein | 1 | Chr01:41808055–41828625 (-) | 9.561e-11 | |
| Glyma.01G123900 | hypothetical protein | AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr01:42831758–42837350 (+) | 1.234e-12 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 5.937e-12 | |
| Glyma.01G124800 | hypothetical protein | AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 | 1 | Chr01:43072403–43076304 (+) | 2.08e-11 | |
| Glyma.01G125400 | hypothetical protein | NA | 1 | Chr01:43394231–43404097 (-) | 2.08e-11 | |
| Glyma.01G125500 | hypothetical protein | NA | 1 | Chr01:43398981–43401979 (+) | 2.08e-11 | |
| Glyma.01G126000 | hypothetical protein | AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein | 1 | Chr01:43477322–43480661 (-) | 2.08e-11 | |
| Glyma.01G126300 | hypothetical protein | NA | 1 | Chr01:43513210–43516682 (-) | 2.08e-11 | |
| Glyma.01G126400 | hypothetical protein | NA | 1 | Chr01:43526917–43529405 (-) | 2.08e-11 | |
| Glyma.01G126500 | hypothetical protein | NA | 1 | Chr01:43543307–43549330 (-) | 2.08e-11 | |
| Glyma.02G287700 | hypothetical protein | AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … | 1 | Chr02:46797935–46805223 (-) | 2.304e-11 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:169480–172727 (+) | 1.668e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 1.281e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 3.16e-12 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 4.666e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 5.386e-15 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 1.104e-11 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 7.309e-15 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 2.241e-16 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 7.002e-16 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 7.002e-16 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 7.002e-16 | |
| Glyma.05G137600 | hypothetical protein | NA | 1 | Chr05:33018107–33020120 (-) | 5.31e-12 | |
| Glyma.05G149900 | hypothetical protein | NA | 1 | Chr05:34389242–34393621 (-) | 8.344e-11 | |
| Glyma.05G182500 | hypothetical protein | AT5G65210:TGA1:bZIP transcription factor family protein | 1 | Chr05:37029299–37037313 (+) | 7.642e-12 | |
| Glyma.05G224200 | hypothetical protein | NA | 1 | Chr05:40307329–40312025 (+) | 5.683e-11 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 2.73e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 3.121e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.041e-19 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 4.228e-15 | |
| Glyma.06G019800 | hypothetical protein | NA | 1 | Chr06:1494230–1501925 (+) | 6.796e-11 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 6.223e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 6.223e-11 | |
| Glyma.06G130700 | hypothetical protein | AT5G53060:RCF3:RNA-binding KH domain-containing protein | 1 | Chr06:10742110–10747597 (-) | 7.009e-12 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.099e-11 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 1.375e-11 | |
| Glyma.09G062900 | hypothetical protein | NA | 1 | Chr09:6004419–6011041 (+) | 6.14e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 8.001e-14 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 3.383e-12 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 1.415e-11 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 1.415e-11 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 1.415e-11 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 1.415e-11 | |
| Glyma.11G090300 | hypothetical protein | AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein | 1 | Chr11:6849007–6855564 (+) | 2.992e-11 | |
| Glyma.11G165300 | hypothetical protein | AT3G18220:LPP4:Phosphatidic acid phosphatase (PAP2) family protein | 1 | Chr11:15738707–15742464 (+) | 7.975e-11 | |
| Glyma.11G165400 | hypothetical protein | NA | 1 | Chr11:15755004–15756199 (+) | 7.975e-11 | |
| Glyma.11G165500 | hypothetical protein | NA | 1 | Chr11:15756251–15760166 (+) | 7.975e-11 | |
| Glyma.11G165900 | hypothetical protein | AT5G58510:AT5G58510:Rab3 GTPase-activating protein catalytic protein | 1 | Chr11:15890687–15912099 (-) | 4.389e-11 | |
| Glyma.11G166100 | hypothetical protein | AT2G30110:UBA1:ubiquitin-activating enzyme 1 | 1 | Chr11:15941545–15948932 (+) | 4.389e-11 | |
| Glyma.11G166200 | hypothetical protein | NA | 1 | Chr11:15951003–15963149 (-) | 4.389e-11 | |
| Glyma.11G167100 | hypothetical protein | NA | 1 | Chr11:16310396–16317417 (+) | 4.389e-11 | |
| Glyma.11G167400 | hypothetical protein | NA | 1 | Chr11:16491689–16494364 (-) | 4.389e-11 | |
| Glyma.11G167800 | hypothetical protein | NA | 1 | Chr11:16649420–16666371 (+) | 4.389e-11 | |
| Glyma.11G169500 | hypothetical protein | NA | 1 | Chr11:18001828–18002310 (+) | 4.389e-11 | |
| Glyma.11G169700 | hypothetical protein | AT1G07110:F2KP:fructose-2,6-bisphosphatase | 1 | Chr11:18034188–18046104 (-) | 4.389e-11 | |
| Glyma.11G170100 | hypothetical protein | NA | 1 | Chr11:18127748–18139401 (-) | 4.389e-11 | |
| Glyma.11G170300 | hypothetical protein | AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 | 1 | Chr11:18242402–18247271 (+) | 4.389e-11 | |
| Glyma.11G170700 | hypothetical protein | AT5G23880:CPSF100:cleavage and polyadenylation specificity factor 100 | 1 | Chr11:18313678–18328202 (-) | 4.389e-11 | |
| Glyma.11G170800 | hypothetical protein | NA | 1 | Chr11:18343004–18346283 (+) | 4.389e-11 | |
| Glyma.11G170900 | hypothetical protein | AT5G58610:AT5G58610:PHD finger transcription factor | 1 | Chr11:18345392–18359356 (-) | 4.389e-11 | |
| Glyma.11G179000 | hypothetical protein | AT2G27230:LHW:transcription factor-like protein | 1 | Chr11:24412040–24417199 (+) | 8.532e-12 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 1.346e-13 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 1.346e-13 | |
| Glyma.12G198700 | hypothetical protein | AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein | 1 | Chr12:36001658–36004086 (+) | 3.851e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 5.871e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 5.871e-11 | |
| Glyma.13G095000 | hypothetical protein | NA | 1 | Chr13:21005327–21006774 (-) | 1.813e-12 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 2.429e-11 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 2.429e-11 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 2.429e-11 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 1.245e-11 | |
| Glyma.13G224300 | hypothetical protein | NA | 1 | Chr13:33703380–33715996 (-) | 4.672e-12 | |
| Glyma.13G224500 | hypothetical protein | AT1G29750:RKF1:receptor-like kinase in flowers 1 | 1 | Chr13:33725180–33735368 (+) | 3.765e-11 | |
| Glyma.14G063600 | hypothetical protein | AT5G05840:AT5G05840:replication factor C subunit, putative (DUF620) | 1 | Chr14:5163603–5167769 (+) | 9.659e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 7.116e-11 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 5.313e-12 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 3.901e-11 | |
| Glyma.16G031600 | hypothetical protein | NA | 1 | Chr16:2964569–2985013 (+) | 4.832e-13 | |
| Glyma.16G057600 | hypothetical protein | AT3G27170:CLC-B:chloride channel B | 1 | Chr16:5650591–5655830 (+) | 2.043e-12 | |
| Glyma.16G057700 | hypothetical protein | AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr16:5656328–5663040 (-) | 6.359e-11 | |
| Glyma.16G105100 | hypothetical protein | NA | 1 | Chr16:21259552–21267517 (-) | 2.172e-11 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 3.929e-12 | |
| Glyma.16G117300 | hypothetical protein | NA | 1 | Chr16:26226934–26227350 (+) | 1.698e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 2.833e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 8.462e-12 | |
| Glyma.16G118200 | hypothetical protein | NA | 1 | Chr16:26337169–26338323 (+) | 4.131e-11 | |
| Glyma.16G178900 | hypothetical protein | AT4G25720:QC:glutaminyl cyclase | 1 | Chr16:33954446–33960344 (+) | 1.91e-11 | |
| Glyma.16G189000 | hypothetical protein | NA | 1 | Chr16:35160485–35167548 (-) | 8.22e-11 | |
| Glyma.16G209400 | hypothetical protein | AT1G17840:ABCG11:white-brown complex-like protein | 1 | Chr16:36871978–36878151 (-) | 8.3e-11 | |
| Glyma.17G251200 | hypothetical protein | NA | 1 | Chr17:40605249–40607536 (+) | 6.295e-11 | |
| Glyma.18G266200 | hypothetical protein | NA | 1 | Chr18:55065716–55066843 (-) | 1.678e-11 | |
| Glyma.18G266400 | hypothetical protein | AT3G29390:RIK:RS2-interacting KH protein | 1 | Chr18:55076548–55086297 (+) | 1.64e-12 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 2.695e-12 | |
| Glyma.19G005200 | hypothetical protein | AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein | 1 | Chr19:472201–476152 (-) | 9.013e-12 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 5.027e-11 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1123637–1130946 (+) | 5.027e-11 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1134716–1143232 (+) | 8.733e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 1.093e-12 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 1.093e-12 | |
| Glyma.20G013100 | hypothetical protein | NA | 1 | Chr20:1134080–1135710 (-) | 1.84e-11 | |
| Glyma.20G109800 | hypothetical protein | AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr20:35213258–35219502 (+) | 2.881e-11 | |
| Glyma.20G110000 | hypothetical protein | AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 | 1 | Chr20:35229423–35231861 (+) | 4.228e-12 |