Overview Annotation GWAS Evidence Associated genes

P40942

Metabolite ID
P40942
Deionized mass
1028.5198 Da
Average m/z
1029.5250
Average RT
20.4540
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G003100 hypothetical protein AT1G69070:AT1G69070:nucleolar-like protein 1Chr02:346363–354600 (-)1.063e-12
Glyma.02G003700 hypothetical protein AT3G23430:PHO1:phosphate 1 1Chr02:431852–445384 (+)1.063e-12
Glyma.07G083200 hypothetical protein NA 1Chr07:7657310–7668139 (-)1.428e-12
Glyma.07G083400 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2 1Chr07:7685748–7694834 (-)1.428e-12
Glyma.07G084500 hypothetical protein AT4G28990:AT4G28990:RNA-binding protein-like protein 1Chr07:7788320–7793377 (+)1.428e-12
Glyma.13G100700 hypothetical protein AT4G25990:CIL:CCT motif family protein 1Chr13:21588821–21592548 (-)8.679e-11
Glyma.20G140800 hypothetical protein AT5G54520:AT5G54520:Transducin/WD40 repeat-like superfamily protein 1Chr20:37955826–37965964 (-)5.558e-12