Overview Annotation GWAS Evidence Associated genes

P40879

Metabolite ID
P40879
Deionized mass
552.2885 Da
Average m/z
553.2952
Average RT
20.4097
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G047500 hypothetical protein AT2G32990:GH9B8:glycosyl hydrolase 9B8 2Chr14:3618968–3625175 (-)5.081e-12
Glyma.05G014600 hypothetical protein NA 1Chr05:1355904–1357960 (+)3.515e-11
Glyma.12G020400 hypothetical protein AT1G51500:ABCG12:ABC-2 type transporter family protein 1Chr12:1445666–1452363 (-)5.506e-12
Glyma.13G041000 hypothetical protein NA 1Chr13:13086878–13092591 (+)6.015e-13
Glyma.13G206500 hypothetical protein AT4G04880:AT4G04880:adenosine/AMP deaminase family protein 1Chr13:32017472–32022810 (-)2.137e-11
Glyma.14G046900 WBb76L15.7 AT4G15410:PUX5:serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma 1Chr14:3568085–3570975 (+)5.081e-12
Glyma.14G048200 hypothetical protein NA 1Chr14:3737773–3746209 (-)5.081e-12
Glyma.14G048600 hypothetical protein NA 1Chr14:3778838–3783437 (-)5.081e-12