Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P40670

Metabolite ID
P40670
Deionized mass
364.2198 Da
Average m/z
365.2265
Average RT
20.3040
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
55
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

55 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 2Chr03:2007617–2009871 (+)5.142e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)2.254e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.683e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.062e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)7.343e-15
Glyma.15G107500 hypothetical protein NA 2Chr15:8435042–8443925 (+)8.362e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.141e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)5.79e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)8.514e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.289e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.634e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.634e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.634e-12
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)7.955e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)7.955e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)7.955e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)7.955e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.772e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.27e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.146e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)2.254e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)9.07e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.683e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.683e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.683e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.683e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)1.512e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)1.512e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.513e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.513e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.062e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.343e-15
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.391e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)2.406e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)2.406e-12
Glyma.15G106000 hypothetical protein AT4G21760:BGLU47:beta-glucosidase 47 1Chr15:8307131–8316135 (+)8.053e-11
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)3.322e-13
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)4.097e-12
Glyma.15G109500 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 1Chr15:8591856–8593774 (-)8.387e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)1.522e-11
Glyma.16G051900 hypothetical protein NA 1Chr16:5009359–5009660 (+)1.788e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)1.851e-11
Glyma.16G105300 hypothetical protein AT4G19120:ERD3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:21299154–21305321 (-)1.835e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.321e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)7.354e-13
Glyma.16G166600 hypothetical protein NA 1Chr16:32589393–32591093 (+)4.959e-11
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)5.301e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.992e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)8.424e-11
Glyma.18G220200 hypothetical protein AT2G38650:GAUT7:galacturonosyltransferase 7 1Chr18:50714270–50723555 (-)6.958e-13
Glyma.18G220300 hypothetical protein NA 1Chr18:50719690–50720509 (-)6.958e-13
Glyma.18G220800 hypothetical protein NA 1Chr18:50782488–50785467 (+)8.648e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)3.419e-11
Glyma.19G147000 hypothetical protein NA 1Chr19:40784257–40785271 (-)2.719e-11
Glyma.19G147100 hypothetical protein NA 1Chr19:40799107–40802473 (+)2.719e-11