Overview Annotation GWAS Evidence Associated genes

P40510

Metabolite ID
P40510
Deionized mass
162.1044 Da
Average m/z
325.2143
Average RT
20.2146
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.006e-11
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 1Chr04:46220242–46235879 (+)2.044e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.693e-12
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)9.01e-12
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)1.172e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)9.94e-11