Overview Annotation GWAS Evidence Associated genes

P40401

Metabolite ID
P40401
Deionized mass
1130.5583 Da
Average m/z
1131.5611
Average RT
20.1529
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G172600 IFR1 NA 1Chr01:50980302–50982573 (-)1.95e-11
Glyma.01G172900 hypothetical protein NA 1Chr01:51020276–51025649 (-)1.95e-11
Glyma.01G173000 hypothetical protein NA 1Chr01:51026937–51035200 (+)1.95e-11
Glyma.02G304500 hypothetical protein AT5G48300:ADG1:ADP glucose pyrophosphorylase 1 1Chr02:47950037–47954106 (+)7.989e-11
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper… 1Chr06:47339957–47343650 (-)7.045e-11
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 1Chr08:11253074–11256505 (+)1.501e-11
Glyma.13G324800 hypothetical protein AT1G08040:AT1G08040:trimethylguanosine synthase (DUF707)__AT2G28310:AT2G28310:trimethylguanosine synthase (DUF707) 1Chr13:41985962–41992540 (+)2.687e-11