P40232
Metabolite ID
P40232
Deionized mass
499.7324 Da
Average m/z
500.7390
Average RT
20.0396
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.03G021400 | hypothetical protein | AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein | 3 | Chr03:2202325–2234931 (+) | 4.945e-11 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 2 | Chr05:32021521–32025767 (-) | 1.173e-12 | |
| Glyma.08G117700 | hypothetical protein | NA | 2 | Chr08:9080318–9084658 (-) | 6.786e-11 | |
| Glyma.08G147500 | hypothetical protein | AT3G18680:AT3G18680:Amino acid kinase family protein | 2 | Chr08:11253074–11256505 (+) | 2.363e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 4.951e-12 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 4.951e-12 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 1.879e-11 | |
| Glyma.01G120000 | hypothetical protein | NA | 1 | Chr01:41270985–41274854 (+) | 5.314e-11 | |
| Glyma.02G151500 | hypothetical protein | AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein | 1 | Chr02:15586732–15588774 (+) | 9.464e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 5.955e-13 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 9.216e-13 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 1.402e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 1.173e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 4.178e-13 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 9.935e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 9.935e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 9.935e-13 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 2.59e-16 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.48e-21 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.103e-13 | |
| Glyma.06G019800 | hypothetical protein | NA | 1 | Chr06:1494230–1501925 (+) | 4.28e-12 | |
| Glyma.06G305200 | hypothetical protein | AT3G21690:AT3G21690:MATE efflux family protein | 1 | Chr06:49420013–49426780 (-) | 1.45e-12 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 3.066e-13 | |
| Glyma.08G147200 | hypothetical protein | AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 | 1 | Chr08:11225587–11227445 (+) | 3.086e-11 | |
| Glyma.08G147300 | hypothetical protein | NA | 1 | Chr08:11238871–11242682 (+) | 4.291e-11 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 6.158e-12 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 2.251e-11 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 3.866e-11 | |
| Glyma.11G095100 | hypothetical protein | NA | 1 | Chr11:7212438–7214276 (-) | 2.779e-12 | |
| Glyma.11G183200 | hypothetical protein | AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein | 1 | Chr11:25070908–25075185 (-) | 7.515e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 2.921e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 2.921e-11 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 4.692e-13 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 2.918e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 2.918e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 3.739e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 3.739e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 4.951e-12 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 9.265e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 3.116e-11 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 1.879e-11 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 3.989e-14 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 6.133e-14 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 3.989e-14 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 3.989e-14 | |
| Glyma.15G257100 | hypothetical protein | AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein | 1 | Chr15:48661607–48665946 (-) | 6.416e-11 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 7.964e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 1.625e-12 | |
| Glyma.16G140000 | hypothetical protein | AT5G01820:SR1:serine/threonine protein kinase 1 | 1 | Chr16:29738375–29739010 (+) | 1.036e-12 | |
| Glyma.16G161500 | hypothetical protein | NA | 1 | Chr16:32076715–32092322 (-) | 1.102e-11 | |
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr16:35831912–35835153 (+) | 8.331e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 1.784e-11 | |
| Glyma.20G101700 | hypothetical protein | AT5G08580:AT5G08580:Calcium-binding EF hand family protein | 1 | Chr20:34467936–34475476 (-) | 7.642e-11 |