Overview Annotation GWAS Evidence Associated genes

P40208

Metabolite ID
P40208
Deionized mass
614.1981 Da
Average m/z
615.2046
Average RT
20.0202
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)6.533e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.124e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.496e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.124e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.124e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)6.949e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)9.115e-11