Overview Annotation GWAS Evidence Associated genes

P40059

Metabolite ID
P40059
Deionized mass
586.4228 Da
Average m/z
587.4266
Average RT
19.8942
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
31
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

31 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)7.052e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)3.197e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)8.307e-13
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)6.751e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)1.368e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.875e-11
Glyma.07G058600 hypothetical protein AT5G12230:MED19A:mediator of RNA polymerase II transcription subunit 19a-like protein 1Chr07:5240996–5247125 (-)6.647e-11
Glyma.07G058700 hypothetical protein AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein 1Chr07:5251199–5260710 (+)6.647e-11
Glyma.08G107700 RHG4 receptor-like kinase RHG4 NA 1Chr08:8284689–8288765 (+)2.179e-11
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 1Chr08:8296196–8307328 (-)2.48e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.079e-12
Glyma.11G008600 hypothetical protein AT5G16680:AT5G16680:RING/FYVE/PHD zinc finger superfamily protein 1Chr11:596553–605827 (+)9.852e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)3.355e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.399e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.399e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)3.613e-13
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)7.052e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)7.052e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)7.052e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)7.052e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)9.885e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.782e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.123e-11
Glyma.16G157200 hypothetical protein AT1G71850:AT1G71850:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr16:31774664–31777363 (+)2.177e-13
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)7.762e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.697e-13
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)6.474e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)3.4e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)4.847e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)4.109e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)5.649e-12