Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P40037

Metabolite ID
P40037
Deionized mass
475.2283 Da
Average m/z
476.2332
Average RT
19.8801
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3Chr15:21029024–21058079 (-)6.959e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)4.485e-14
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 3Chr18:55076548–55086297 (+)8.959e-16
Glyma.18G267500 hypothetical protein NA 3Chr18:55179516–55181798 (-)9.401e-16
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 2Chr06:14104416–14111842 (+)2.212e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.697e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.697e-13
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)7.505e-13
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)5.417e-11
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)2.248e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.838e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.827e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.827e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.827e-12
Glyma.06G126300 hypothetical protein NA 1Chr06:10331312–10341252 (-)5.847e-11
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)9.795e-13
Glyma.06G126700 hypothetical protein AT5G53120:SPDS3:spermidine synthase 3 1Chr06:10384771–10389578 (-)2.575e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)6.957e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.355e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.355e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.039e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.039e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.697e-13
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 1Chr15:20964449–20974340 (+)6.959e-11
Glyma.15G192900 hypothetical protein NA 1Chr15:21108370–21110353 (+)6.959e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)3.624e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)8.877e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.027e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.466e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.82e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)4.417e-12
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)7.27e-11
Glyma.18G264700 hypothetical protein AT5G15470:GAUT14:galacturonosyltransferase 14__AT3G01040:GAUT13:galacturonosyltransferase 13 1Chr18:54973306–54979374 (-)7.138e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.155e-16
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)5.531e-23
Glyma.18G267200 hypothetical protein NA 1Chr18:55161119–55166101 (-)5.573e-11
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)5.578e-15
Glyma.18G273500 hypothetical protein AT5G15800:SEP1:K-box region and MADS-box transcription factor family protein 1Chr18:55619766–55625860 (+)5.845e-11
Glyma.18G297600 hypothetical protein AT2G43780:AT2G43780:cytochrome oxidase assembly protein 1Chr18:57497436–57498545 (-)1.031e-12
Glyma.18G299700 hypothetical protein AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein 1Chr18:57755837–57757150 (-)2.185e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)2.79e-13
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)3.542e-15
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.659e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.659e-11