Overview Annotation GWAS Evidence Associated genes

P39878

Metabolite ID
P39878
Deionized mass
343.2361 Da
Average m/z
344.2400
Average RT
19.7954
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G171900 hypothetical protein AT5G66460:MAN7:Glycosyl hydrolase superfamily protein 2Chr01:50912520–50915454 (-)1.749e-11
Glyma.01G172500 hypothetical protein NA 1Chr01:50960881–50965173 (-)2.214e-11
Glyma.01G172900 hypothetical protein NA 1Chr01:51020276–51025649 (-)1.749e-11
Glyma.01G173300 hypothetical protein AT5G66530:AT5G66530:Galactose mutarotase-like superfamily protein 1Chr01:51040569–51044168 (-)5.036e-11
Glyma.01G173400 hypothetical protein AT5G48330:RUG2:Regulator of chromosome condensation (RCC1) family protein 1Chr01:51043597–51046132 (+)5.036e-11
Glyma.01G211800 hypothetical protein NA 1Chr01:54334961–54337099 (-)2.214e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)4.616e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)4.616e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)4.616e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)8.686e-12
Glyma.06G285000 hypothetical protein AT2G42390:AT2G42390:kinase C substrate, heavy chain-like protein 1Chr06:47349868–47363027 (-)8.211e-12
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)1.249e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.9e-11