Overview Annotation GWAS Evidence Associated genes

P39864

Metabolite ID
P39864
Deionized mass
640.3072 Da
Average m/z
641.3139
Average RT
19.7882
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G031900 hypothetical protein AT1G23870:TPS9:trehalose-phosphatase/synthase 9 1Chr01:3342396–3347771 (+)7.282e-12
Glyma.01G032400 hypothetical protein NA 1Chr01:3404831–3411453 (+)3.208e-13
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)8.344e-11
Glyma.11G109400 hypothetical protein AT4G28510:PHB1:prohibitin 1 1Chr11:8340396–8344235 (-)6.147e-11
Glyma.11G109500 hypothetical protein NA 1Chr11:8345676–8351718 (+)6.147e-11
Glyma.11G109900 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 1Chr11:8378708–8386493 (-)1.569e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.682e-13
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)2.692e-11
Glyma.14G221000 hypothetical protein AT1G23500:AT1G23500:GDSL-like Lipase/Acylhydrolase superfamily protein__AT1G20135:AT1G20135:GDSL-like Lipase/Acylhydrol… 1Chr14:48602116–48604600 (+)8.992e-11