Overview Annotation GWAS Evidence Associated genes

P39793

Metabolite ID
P39793
Deionized mass
130.0406 Da
Average m/z
131.0482
Average RT
19.7516
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.166e-11
Glyma.08G321100 hypothetical protein NA 2Chr08:44009941–44016332 (+)2.137e-13
Glyma.01G045600 hypothetical protein NA 1Chr01:5242432–5245038 (-)2.173e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.483e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.483e-11
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)4.882e-12
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)4.882e-12
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)1.744e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.589e-11
Glyma.06G150700 hypothetical protein AT1G49180:AT1G49180:protein kinase family protein 1Chr06:12289992–12292323 (+)1.274e-13
Glyma.06G164200 hypothetical protein NA 1Chr06:13571908–13572768 (+)5.364e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.166e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.166e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.166e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.166e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)4.525e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)6.836e-11
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)3.386e-12
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)3.386e-12
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)3.386e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)5.909e-11
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)8.307e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)8.427e-11
Glyma.20G013700 hypothetical protein NA 1Chr20:1223277–1224375 (+)5.855e-11