Overview Annotation GWAS Evidence Associated genes

P39711

Metabolite ID
P39711
Deionized mass
1098.4627 Da
Average m/z
550.2380
Average RT
19.7055
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G025000 hypothetical protein NA 3Chr08:1971161–1977592 (-)5.71e-11
Glyma.19G185900 hypothetical protein NA 3Chr19:44436187–44441482 (-)6.954e-11
Glyma.08G025100 hypothetical protein AT4G10850:SWEET7:Nodulin MtN3 family protein 1Chr08:1981178–1984663 (-)5.71e-11
Glyma.08G193300 hypothetical protein NA 1Chr08:15557987–15564104 (-)9.774e-12
Glyma.16G213700 hypothetical protein NA 1Chr16:37160318–37164316 (-)3.264e-18
Glyma.16G218100 hypothetical protein AT3G17690:CNGC19:cyclic nucleotide gated channel 19 1Chr16:37549733–37559243 (-)6.844e-11
Glyma.18G009700 hypothetical protein AT1G13440:GAPC2:glyceraldehyde-3-phosphate dehydrogenase C2 1Chr18:691244–695517 (-)2.261e-13
Glyma.18G009800 hypothetical protein AT3G48140:AT3G48140:B12D protein 1Chr18:702106–703575 (+)2.261e-13
Glyma.18G216800 hypothetical protein NA 1Chr18:50371768–50388753 (+)1.724e-11