Overview Annotation GWAS Evidence Associated genes

P39640

Metabolite ID
P39640
Deionized mass
533.3065 Da
Average m/z
534.3138
Average RT
19.6599
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)6.227e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)3.529e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.195e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.031e-11
Glyma.06G078000 hypothetical protein NA 1Chr06:6040154–6044900 (-)6.176e-11
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 1Chr07:7187362–7192149 (+)1.182e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)9.514e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.15e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)6.736e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.73e-11
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)1.855e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.044e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.026e-11