Overview Annotation GWAS Evidence Associated genes

P39531

Metabolite ID
P39531
Deionized mass
429.2723 Da
Average m/z
430.2784
Average RT
19.5981
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G146500 hypothetical protein AT5G23670:LCB2:long chain base2 2Chr16:30737459–30743042 (+)1.154e-12
Glyma.09G050000 hypothetical protein NA 1Chr09:4357237–4360131 (+)6.718e-11
Glyma.09G050100 hypothetical protein AT1G30910:AT1G30910:Molybdenum cofactor sulfurase family protein__AT5G44720:AT5G44720:Molybdenum cofactor sulfurase fam… 1Chr09:4363430–4366853 (+)6.718e-11
Glyma.16G146600 hypothetical protein AT1G12840:DET3:vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) 1Chr16:30744340–30749727 (+)1.154e-12
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)1.154e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.154e-12
Glyma.16G147200 hypothetical protein NA 1Chr16:30790434–30794730 (+)1.162e-11
Glyma.16G147800 hypothetical protein NA 1Chr16:30853440–30863121 (+)5.376e-12
Glyma.16G148000 hypothetical protein AT3G19330:AT3G19330:transmembrane protein, putative (DUF677) 1Chr16:30872557–30874962 (-)5.376e-12