Overview Annotation GWAS Evidence Associated genes

P39521

Metabolite ID
P39521
Deionized mass
497.2066 Da
Average m/z
498.2158
Average RT
19.5909
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G217300 hypothetical protein AT3G12710:AT3G12710:DNA glycosylase superfamily protein 1Chr15:35869863–35873955 (+)1.082e-11
Glyma.15G217400 hypothetical protein AT3G12680:HUA1:floral homeotic protein (HUA1) 1Chr15:35914376–35930906 (+)1.082e-11
Glyma.15G217500 hypothetical protein AT3G12670:emb2742:CTP synthase family protein 1Chr15:36301835–36309851 (-)1.082e-11
Glyma.15G218000 hypothetical protein NA 1Chr15:37031598–37033350 (-)1.082e-11
Glyma.15G219600 hypothetical protein NA 1Chr15:38433708–38438520 (-)7.387e-13
Glyma.15G219700 hypothetical protein NA 1Chr15:38444162–38462869 (-)1.707e-11
Glyma.15G220600 hypothetical protein NA 1Chr15:39762186–39771163 (-)7.387e-13
Glyma.15G220800 hypothetical protein NA 1Chr15:39878275–39882927 (+)7.387e-13
Glyma.15G222300 hypothetical protein NA 1Chr15:40313530–40318470 (-)4.567e-16