Overview Annotation GWAS Evidence Associated genes

P39381

Metabolite ID
P39381
Deionized mass
506.2141 Da
Average m/z
507.2196
Average RT
19.5149
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G147300 hypothetical protein NA 3Chr08:11238871–11242682 (+)1.338e-14
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)1.728e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)3.034e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)7.785e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)7.785e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)7.785e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)7.785e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)7.785e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)7.785e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)7.785e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.965e-11
Glyma.08G145700 hypothetical protein AT5G64730:AT5G64730:Transducin/WD40 repeat-like superfamily protein 1Chr08:11083230–11086950 (-)8.696e-11
Glyma.08G145900 hypothetical protein AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 1Chr08:11092669–11096142 (-)8.697e-11
Glyma.08G146100 hypothetical protein NA 1Chr08:11119305–11124078 (+)1.116e-11
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)8.163e-14
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)3.439e-14