Overview Annotation GWAS Evidence Associated genes

P39242

Metabolite ID
P39242
Deionized mass
170.1289 Da
Average m/z
171.1360
Average RT
19.4521
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
3
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

3 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G118300 hypothetical protein NA 1Chr05:31119890–31126767 (+)8.425e-11
Glyma.05G118600 hypothetical protein AT2G13840:AT2G13840:Polymerase/histidinol phosphatase-like protein 1Chr05:31145302–31148731 (-)8.425e-11
Glyma.05G121100 hypothetical protein AT3G26420:ATRZ-1A:RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing pr… 1Chr05:31400610–31404065 (+)5.085e-11