Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P39235

Metabolite ID
P39235
Deionized mass
577.4550 Da
Average m/z
578.4654
Average RT
19.4509
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 2Chr05:37029299–37037313 (+)4.502e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.909e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.005e-12
Glyma.14G213400 hypothetical protein NA 2Chr14:47844823–47847028 (+)2.521e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)2.269e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.002e-12
Glyma.04G188900 hypothetical protein NA 1Chr04:45982982–45986148 (+)7.925e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)3.916e-12
Glyma.05G182900 hypothetical protein NA 1Chr05:37056753–37057349 (-)7.039e-12
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr05:37059525–37070146 (-)7.039e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.189e-12
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.103e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.398e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.103e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.103e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.398e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)9.755e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.167e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.595e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.064e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.064e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.064e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.064e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.567e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.567e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.567e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)3.868e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)3.893e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)5.602e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.909e-12
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)4.982e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.005e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.523e-11
Glyma.15G037400 hypothetical protein AT5G59420:ORP3C:OSBP(oxysterol binding protein)-related protein 3C 1Chr15:2950291–2955686 (-)7.704e-11
Glyma.15G037600 hypothetical protein AT2G29050:RBL1:RHOMBOID-like 1 1Chr15:2964304–2967785 (+)4.822e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.112e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)3.702e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.082e-16
Glyma.16G066000 hypothetical protein AT5G40660:AT5G40660:ATP12 protein-like protein 1Chr16:6570689–6574950 (+)4.98e-11
Glyma.16G166900 hypothetical protein NA 1Chr16:32619260–32629262 (-)8.599e-12
Glyma.17G099300 hypothetical protein AT3G47610:AT3G47610:transcription regulator/ zinc ion binding protein 1Chr17:7838198–7840795 (-)1.854e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.042e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.019e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)4.941e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.304e-12