Overview Annotation GWAS Evidence Associated genes

P39148

Metabolite ID
P39148
Deionized mass
238.1552 Da
Average m/z
239.1632
Average RT
19.4035
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
34
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

34 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)2.383e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.991e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)6.443e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.184e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.184e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)4.687e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.264e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.169e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.359e-12
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)5.879e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)6.497e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)5.879e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)5.879e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)6.496e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)8.799e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.772e-11
Glyma.08G117700 hypothetical protein NA 1Chr08:9080318–9084658 (-)9.94e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)2.912e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.942e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.942e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)4.638e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.731e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.134e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.134e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.787e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.991e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.994e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.116e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.994e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.994e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)6.443e-13
Glyma.18G262800 hypothetical protein NA 1Chr18:54832649–54833890 (+)9.606e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.135e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.777e-11