Overview Annotation GWAS Evidence Associated genes

P39087

Metabolite ID
P39087
Deionized mass
289.1716 Da
Average m/z
290.1807
Average RT
19.3640
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
35
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

35 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)5.133e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.491e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)2.584e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)6.665e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)8.989e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.313e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)8.864e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.022e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)9.784e-12
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper… 1Chr06:47339957–47343650 (-)7.728e-11
Glyma.06G285200 hypothetical protein AT2G31060:EMB2785:elongation factor family protein 1Chr06:47380397–47390651 (+)1.272e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.401e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)7.424e-14
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.401e-13
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.401e-13
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)7.424e-14
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)1.252e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)3.662e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.491e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)9.491e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.491e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.491e-12
Glyma.13G200800 hypothetical protein AT2G21510:AT2G21510:DNAJ heat shock N-terminal domain-containing protein 1Chr13:31438634–31445721 (+)2.738e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.272e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)4.063e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.138e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.086e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.138e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.138e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)2.394e-18
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)7.915e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.107e-13
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)2.154e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)3.964e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.93e-11