Overview Annotation GWAS Evidence Associated genes

P39076

Metabolite ID
P39076
Deionized mass
505.7126 Da
Average m/z
506.7217
Average RT
19.3550
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)4.639e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)6.463e-13
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)2.752e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)2.179e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)8.914e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.785e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.785e-13
Glyma.02G303800 hypothetical protein AT3G20910:NF-YA9:nuclear factor Y, subunit A9 1Chr02:47896187–47900062 (-)4.842e-11
Glyma.02G304100 hypothetical protein AT1G07380:AT1G07380:Neutral/alkaline non-lysosomal ceramidase 1Chr02:47925182–47931754 (+)6.311e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.949e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)4.65e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)6.347e-11
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)4.666e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.15e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.679e-11
Glyma.10G186500 PT7 NA 1Chr10:41946209–41950274 (-)4.955e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.76e-11
Glyma.11G117500 hypothetical protein NA 1Chr11:8932743–8933846 (-)8.207e-11
Glyma.11G118200 hypothetical protein NA 1Chr11:8979431–8983783 (+)5.317e-11
Glyma.11G184400 hypothetical protein NA 1Chr11:25256684–25259757 (+)1.436e-12
Glyma.11G184600 hypothetical protein AT4G08960:AT4G08960:phosphotyrosyl phosphatase activator (PTPA) family protein 1Chr11:25265163–25267323 (-)2.548e-11
Glyma.11G184900 hypothetical protein AT3G44530:HIRA:histone chaperone HIRA-like protein 1Chr11:25289268–25298978 (+)2.549e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.639e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.812e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)6.277e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.657e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)7.734e-11
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)7.551e-12