P39023
Metabolite ID
P39023
Deionized mass
356.2698 Da
Average m/z
357.2788
Average RT
19.3263
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
88
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
88 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G209300 | hypothetical protein | NA | 5 | Chr16:36856833–36863994 (-) | 3.505e-13 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 3 | Chr16:26324650–26336836 (+) | 1.128e-12 | |
| Glyma.16G196900 | hypothetical protein | NA | 3 | Chr16:35841279–35846894 (-) | 5.081e-12 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 2 | Chr12:36289704–36295084 (-) | 1.576e-15 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 2.962e-15 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 6.43e-17 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 3.719e-13 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 4.956e-14 | |
| Glyma.16G117400 | hypothetical protein | NA | 2 | Chr16:26234552–26238233 (-) | 2.564e-12 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 2 | Chr16:36806718–36809299 (+) | 1.458e-12 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 1.311e-12 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 1.311e-12 | |
| Glyma.02G205400 | hypothetical protein | AT5G57880:MPS1:multipolar spindle 1 | 1 | Chr02:39040135–39043181 (-) | 2.859e-11 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:169480–172727 (+) | 3.603e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 4.081e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.101e-15 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 9.811e-11 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 7.927e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 7.927e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 7.927e-11 | |
| Glyma.05G231800 | ALDH2C1 | aldehyde dehydrogenase family 2 member C1 | AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 | 1 | Chr05:40924505–40929251 (+) | 2.566e-13 |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 3.739e-14 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.722e-14 | |
| Glyma.06G079400 | hypothetical protein | NA | 1 | Chr06:6105463–6107101 (+) | 8.66e-12 | |
| Glyma.06G081600 | hypothetical protein | AT5G11490:AT5G11490:adaptin family protein | 1 | Chr06:6273644–6283819 (+) | 4.084e-11 | |
| Glyma.06G084800 | hypothetical protein | NA | 1 | Chr06:6515571–6517480 (-) | 9.973e-13 | |
| Glyma.06G085000 | hypothetical protein | NA | 1 | Chr06:6524339–6529016 (-) | 9.973e-13 | |
| Glyma.06G085100 | hypothetical protein | NA | 1 | Chr06:6531956–6537295 (-) | 9.973e-13 | |
| Glyma.06G085200 | hypothetical protein | NA | 1 | Chr06:6540849–6545557 (+) | 4.855e-13 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 1.133e-12 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 1.133e-12 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 1.133e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 2.322e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 2.322e-11 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 3.285e-11 | |
| Glyma.07G018100 | hypothetical protein | NA | 1 | Chr07:1442368–1445430 (-) | 3.502e-12 | |
| Glyma.07G018300 | hypothetical protein | AT3G27750:EMB3123:PPR containing protein | 1 | Chr07:1457706–1458428 (+) | 3.502e-12 | |
| Glyma.08G122000 | hypothetical protein | AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr08:9397717–9410004 (+) | 6.112e-11 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 5.217e-11 | |
| Glyma.09G060300 | hypothetical protein | AT5G57140:PAP28:purple acid phosphatase 28 | 1 | Chr09:5609003–5612943 (+) | 6.161e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 5.803e-11 | |
| Glyma.09G268900 | hypothetical protein | NA | 1 | Chr09:48638803–48644136 (+) | 9.99e-11 | |
| Glyma.11G162500 | hypothetical protein | AT2G40435:AT2G40435:transcription factor SCREAM-like protein | 1 | Chr11:15087390–15090683 (-) | 3.584e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 7.59e-16 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 7.59e-16 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 1.462e-15 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 1.462e-15 | |
| Glyma.12G198700 | hypothetical protein | AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein | 1 | Chr12:36001658–36004086 (+) | 7.697e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 4.994e-14 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 4.994e-14 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 4.421e-16 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 6.43e-17 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 3.422e-14 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 2.621e-12 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 6.159e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 6.159e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 6.159e-11 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1 | Chr14:5675792–5680343 (+) | 3.584e-12 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 1.744e-11 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 4.956e-14 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 4.5e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 2.983e-13 | |
| Glyma.16G116500 | hypothetical protein | AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein | 1 | Chr16:26057276–26069534 (+) | 6.273e-11 | |
| Glyma.16G117000 | hypothetical protein | NA | 1 | Chr16:26140411–26140830 (+) | 2.206e-11 | |
| Glyma.16G117700 | hypothetical protein | NA | 1 | Chr16:26279957–26283458 (+) | 2.564e-12 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 6.126e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 1.633e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 3.942e-11 | |
| Glyma.16G182600 | hypothetical protein | AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 | 1 | Chr16:34364037–34367765 (-) | 2.9e-11 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 1.934e-14 | |
| Glyma.16G196200 | HSF-32 | heat stress transcription factor 32 | AT5G62020:HSFB2A:heat shock transcription factor B2A | 1 | Chr16:35760178–35761852 (+) | 1.04e-11 |
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr16:35831912–35835153 (+) | 8.391e-11 | |
| Glyma.16G207900 | hypothetical protein | AT5G08450:AT5G08450:zinc finger CCCH domain protein | 1 | Chr16:36754888–36763450 (+) | 8.677e-12 | |
| Glyma.16G208400 | hypothetical protein | NA | 1 | Chr16:36789890–36801967 (-) | 1.035e-11 | |
| Glyma.16G209000 | hypothetical protein | NA | 1 | Chr16:36841786–36845498 (-) | 3.261e-11 | |
| Glyma.16G209400 | hypothetical protein | AT1G17840:ABCG11:white-brown complex-like protein | 1 | Chr16:36871978–36878151 (-) | 4.908e-12 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 5.504e-11 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 5.504e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 1.659e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 1.659e-11 | |
| Glyma.20G013100 | hypothetical protein | NA | 1 | Chr20:1134080–1135710 (-) | 3.114e-11 | |
| Glyma.20G098400 | hypothetical protein | AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b | 1 | Chr20:34151918–34155417 (+) | 5.561e-12 | |
| Glyma.20G106800 | hypothetical protein | AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein | 1 | Chr20:34935548–34940516 (-) | 2.666e-12 | |
| Glyma.20G106900 | hypothetical protein | NA | 1 | Chr20:34962043–34967985 (+) | 6.744e-14 | |
| Glyma.20G107000 | hypothetical protein | NA | 1 | Chr20:34968161–34968457 (+) | 9.559e-12 | |
| Glyma.20G107500 | hypothetical protein | AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr20:35011922–35015196 (-) | 9.063e-11 | |
| Glyma.20G109000 | hypothetical protein | AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein | 1 | Chr20:35134138–35152085 (-) | 8.783e-11 | |
| Glyma.20G109100 | hypothetical protein | AT1G14590:AT1G14590:Nucleotide-diphospho-sugar transferase family protein | 1 | Chr20:35166747–35171332 (+) | 8.783e-11 |