Overview Annotation GWAS Evidence Associated genes

P38953

Metabolite ID
P38953
Deionized mass
568.1537 Da
Average m/z
569.1619
Average RT
19.2967
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)5.093e-13
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.28e-11
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)6.102e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.319e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)7.186e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)9.607e-11