Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P38829

Metabolite ID
P38829
Deionized mass
434.3136 Da
Average m/z
435.3212
Average RT
19.2178
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 3Chr10:48805999–48811533 (-)6.602e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)4.537e-13
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)1.125e-12
Glyma.08G182500 hypothetical protein NA 2Chr08:14639429–14643788 (+)4.897e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)8.893e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.221e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)6.866e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)4.151e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)6.453e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.875e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)2.155e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.437e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.793e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.685e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.685e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.685e-12
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)1.767e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.467e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.812e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)2.882e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.78e-12
Glyma.08G150700 hypothetical protein AT2G44500:AT2G44500:O-fucosyltransferase family protein 1Chr08:11603469–11607610 (+)5.729e-11
Glyma.08G180900 hypothetical protein AT5G64570:XYL4:beta-D-xylosidase 4__AT5G09730:BXL3:beta-xylosidase 3 1Chr08:14516542–14521137 (+)7.3e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)2.169e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)3.361e-14
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)3.999e-11
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)4.454e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.948e-11
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)1.55e-14
Glyma.14G190300 hypothetical protein AT2G04240:XERICO:RING/U-box superfamily protein 1Chr14:45531920–45533895 (-)2.559e-12
Glyma.14G190400 hypothetical protein AT3G07650:COL9:CONSTANS-like 9 1Chr14:45536719–45544087 (-)2.559e-12
Glyma.14G190800 hypothetical protein NA 1Chr14:45566998–45568488 (-)7.629e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.625e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)6.433e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)5.723e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.38e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.098e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.575e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.233e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.132e-12
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)9.216e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)9.216e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.202e-15
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)8.998e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)6.04e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)5.889e-11
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)4.388e-11
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)8.882e-11
Glyma.18G274100 hypothetical protein AT5G38880:AUG5:HAUS augmin-like complex subunit 1Chr18:55672621–55681964 (+)2.121e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.568e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.568e-12
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 1Chr19:3511914–3519141 (+)2.428e-11
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)1.019e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.619e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)3.083e-12
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)6.108e-11