Overview Annotation GWAS Evidence Associated genes

P38819

Metabolite ID
P38819
Deionized mass
424.2510 Da
Average m/z
425.2611
Average RT
19.2140
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)1.107e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)7.939e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.49e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)3.09e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.876e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.876e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)7.231e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.956e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.279e-12
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)4.94e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.228e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.804e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.458e-14
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)1.158e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)7.148e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)7.148e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.768e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.697e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.697e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)6.172e-13
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)5.117e-12
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)9.435e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)9.435e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)8.543e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)3.452e-12
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)2.214e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.123e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.123e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.324e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.324e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.075e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.075e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.281e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.144e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.09e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)5.066e-14
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)6.571e-11
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 1Chr12:37131153–37134096 (+)2.138e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)6.478e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.876e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.876e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.788e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)1.311e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)8.536e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)5.685e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.685e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)2.18e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.007e-11
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)3.784e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)3.874e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.308e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.308e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.573e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)6.359e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)6.89e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.433e-15