Overview Annotation GWAS Evidence Associated genes

P38763

Metabolite ID
P38763
Deionized mass
709.3658 Da
Average m/z
710.3744
Average RT
19.1851
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G178800 hypothetical protein NA 2Chr16:33950003–33953968 (-)7.362e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)6.046e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)7.938e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.343e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.503e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.503e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.503e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.503e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)3.194e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)6.183e-12
Glyma.16G041800 hypothetical protein NA 1Chr16:3914214–3917387 (-)8.913e-11
Glyma.16G178700 hypothetical protein AT5G52660:AT5G52660:Homeodomain-like superfamily protein 1Chr16:33941617–33948775 (+)1.664e-11
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 1Chr16:33954446–33960344 (+)1.664e-11
Glyma.16G179100 BCH2 beta-carotene hydroxylase BCH2 AT4G25700:BETA-OHASE 1:beta-hydroxylase 1__AT5G52570:BETA-OHASE 2:beta-carotene hydroxylase 2 1Chr16:33969618–33972333 (-)1.664e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.362e-11