Overview Annotation GWAS Evidence Associated genes

P38739

Metabolite ID
P38739
Deionized mass
481.2502 Da
Average m/z
482.2563
Average RT
19.1737
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.56e-11
Glyma.02G204500 hypothetical protein NA 1Chr02:38980978–38982630 (-)3.774e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.037e-16
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.375e-14
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)3.459e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.548e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.56e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)5.766e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)8.296e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)8.296e-11
Glyma.19G144200 hypothetical protein AT2G42280:FBH4:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:40545843–40548762 (+)1.872e-11
Glyma.19G144900 hypothetical protein AT3G12150:AT3G12150:alpha/beta hydrolase family protein 1Chr19:40586762–40590616 (+)9.83e-11