Overview Annotation GWAS Evidence Associated genes

P38724

Metabolite ID
P38724
Deionized mass
1100.5382 Da
Average m/z
1101.5482
Average RT
19.1697
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.617e-13
Glyma.06G306000 hypothetical protein AT2G32430:AT2G32430:Galactosyltransferase family protein__AT1G05170:AT1G05170:Galactosyltransferase family protein 2Chr06:49495126–49500468 (+)1.382e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)2.028e-15
Glyma.06G276300 hypothetical protein NA 1Chr06:46741410–46744086 (-)6.956e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.617e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.617e-13
Glyma.11G117500 hypothetical protein NA 1Chr11:8932743–8933846 (-)5.943e-15
Glyma.11G117900 hypothetical protein AT4G39300:AT4G39300:envelope glycoprotein 1Chr11:8957803–8962142 (+)1.58e-13
Glyma.11G118000 hypothetical protein NA 1Chr11:8960547–8966975 (+)1.58e-13
Glyma.11G118200 hypothetical protein NA 1Chr11:8979431–8983783 (+)3.173e-14
Glyma.11G118400 hypothetical protein NA 1Chr11:8999802–9000356 (+)3.464e-13
Glyma.18G179200 hypothetical protein NA 1Chr18:43222934–43228759 (-)1.612e-12